DOWNLOAD AND INSTALLATION
A source package can be downloaded for
INSTALLING THE SOURCE PACKAGE
In order to install the source package on a personal machine or a server use the following command
R CMD INSTALL RegFacEnc_xyz.tar.gz
or to Install in a local directory on a server or on a personal machine use:
R CMD INSTALL RegFacEnc_xyz.tar.gz -l /home/path….
NOTE: Window users must download R tools to install a source package.
R STUDIO
- Unzip the source package.
- Using R Studio Create new project in the unzipped package directory.
- Using the build tab under more select Clean and Rebuild
The current version of RegFacEnc will only work with R version 3.0.0 or higher. The RegFacEnc is dependent on the following R Packages. Please make sure these dependencies are installed on your machine before using RegFacEnc
library(Biostrings)
library(Cairo)
library(gplots)
library(hwriter)
library(igraph)
library(MEET)
library(plyr)
library(seqinr)
library(seqLogo)
source("http://bioconductor.org/biocLite.R")
biocLite(c("Biostrings", "Cairo", "gplots", "hwriter", "igraph", "MEET", "plyr", "seqinr", "seqLogo"))